CDS
| Accession Number | TCMCG058C10211 |
| gbkey | CDS |
| Protein Id | KAF7130176.1 |
| Location | join(13232441..13232654,13232834..13233042,13233306..13233474,13234139..13234285,13236222..13236346,13240751..13240863,13244731..13244867,13246741..13246903,13247061..13248078,13248171..13248238,13248455..13248533,13248868..13249020,13250424..13250481,13251121..13251254,13251355..13251479,13251731..13252113,13252575..13252699,13254019..13254217,13254323..13256089,13256183..13256301) |
| Organism | Rhododendron simsii |
| locus_tag | RHSIM_Rhsim10G0100200 |
Protein
| Length | 1834aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA588298, BioSample:SAMN13241185 |
| db_source | WJXA01000010.1 |
| Definition | hypothetical protein RHSIM_Rhsim10G0100200 [Rhododendron simsii] |
| Locus_tag | RHSIM_Rhsim10G0100200 |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Nuclear pore complex protein |
| KEGG_TC | 1.I.1 |
| KEGG_Module |
M00427
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14317
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03013
[VIEW IN KEGG] ko05169 [VIEW IN KEGG] map03013 [VIEW IN KEGG] map05169 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGCAGCAACTGAAGGCAATAGTATTATCCTTCGATCAGACGACGAAGTGGAAGGAGAGCGCAGAGGCTCGGATGACTACTGCTTCATTGGGATCGGGGAAGCTGTCCCTATTAAGCCTGGGGATGATGCTGAATTCAATCCCCAAAACCCTCCGTCTAAACCCCTGTCCGTCTCTGAACGTTATGGTCTCATATTTGTTTCTCATTCCACTGGGTTTTGTGTTGCAAGGACCAAGGATATTATAGACTCAGCCAAGGAGATTGCAGAGAAAGGGAGTGGTTCATCAATTAAAGCGTTGAGTGTTGTGGATGTCCCAATTGGGCAGGTGTACATATTAGCTTTGTCAGCTGACTCATCCACTCTGGCTGCCTGTATTGATGGCAAAATTCATTTCTTCTCTGTCGCCTCATTCCTCAATAAGGTCCAAAGCCCGTTTTTCTCTTGCTCACTTGACGACTCAAGTTGTGTAAAAGACATGCAATGGACGAAAAAGTTGGAAAATTACTATGCTGTTCTTTCAAATCATGGGAATCTCTATTATGGAGCTGGACAAGATCCTCTTAAAAATGTAATGGATGATGTTGATGCTTTTGATTGGAGTTTGAAAGGAAATTTGGTTGCTGTCGCACGAAAGAATACTCTTAGCATCATGTCATTAAAATTGAAGGAAAAAGTCAGTATATCATTGTCGTTCGACTCATGGATTGGTGATTCCAATTTGAATTTTGGCGTAAAAGTGGATTCTATCAGGTGGGTACGTCCAGATGCTATAATACTAGGATGCTTTAAATTAACTTCAGATGGAAAGGAGGAAAATTACCTGGTTCAAGTCATCACAAGCAAAGATGGAAAATTCACGGATACTTCTTCCAAGCCAATTGTGCTATCATTCAGTGATGTGTTTGAAGCTTTTGTTGATGATATTGTGCCGTTTGGAAGTGGACCATACATGTCCATGAGCTATTTAAGTAGATGTGAGCTTGCCATTACTGCTAACCGAAAGAGTACAGATCAGCACATTGTATTGTTCGGTTGGTCACTGGATGATAGAAAGGAAGCTGCAGTTATTGATATTGTGAGAGACACCCTGTGTCCAAAGATTGCCCTTCAAGGAAATGGTGACGATAATATTGTCCTGGGACTCTGCGTGGACAGGATTTCTCAGAATGAGAAAATTGAAGTCCAGCTTGGAGCTGAATATAAGGAACTTTCACCTTTTTGCATTCTTCTGTGTCTTTCTTTAGACGGAAAGCTTTTTATGTACCAAGTTGCCAGTGTCGCAGGACCTTCAGTTCCACCTGACAACGTCTCTCTGCTTTCTGATGAGGAAGATGATACTCCTACATTGGTATCTTCGGAAGATGGAAAGCCTAGTACTTCTGGTGGTTTGGTTTCCAAGAGTGTGCAAGTGGGTTTGCGTTTTCAATCTCAGGGAGTAGACAAGAAGGAACTTCTCATCAAAGAAGGTAATGGGATTCCTGTGACAAATGCACCAATGCGTCCAGTGAATTCAGAGAGACTTGAAATCCTCGGGCAGCAGAAGTTTCTTGTAACTAAGGTAGACCAAGATAAAGATGGTCAACAATCTCTGCTTTCTGCTTCGCAAGGTCCATATTTTCGACATTTGTCTCCGAAGTCCTCTTGTTTGGAGGAACCTGGGCCTGTGGTTATAGATTTCAGCAAGGTAGAAACTAAAAAGCTTCCTGAAGGTGGATCCAGTCTTGTTTCTTTTCCAGGAAAATTTTCATCTAATGTGTCCAGCCAGTCCATTTCCACAACTCTTCCCAGAGCTTTTGACTTAGGTAAGGAGTTGCCTGAAAATCTTGAATCAGCTAGCCTAAAGGGTGCTCCATCAAGTCCAACATCGAATGCAAAACATACTTTTCCTGTAACCTCTGATGGAGGGTTTTCGTTTGTTCCTCCAGGTTCTATTCAGAGTAATCGATCTGACACCTCCAGAACAAATTCGAGTGATGCACATTTTCCTGGAGTACCACTTGGAAACTTTTCCCATGCAAAACAAGCTGCTGGCTCATCTATGGCGTTCTCTTCTTCTGGAAAAACATTGTATAGTGGTGGACAGAGTGCTTCAACTGGGCCAGTAATTGCCCATCCACTGCCTGCCATTCGTAGCTCAGTATCGTCATCCCAACAGAATTTTGCACCGGTGAACTCTTCCAAAGAGAATTACAGAGCTGCCTCCCCGACAAGGCTGCTGAATACTGAGCCTCAGCTGTCAAAACAATTTGGCAATGTAGGAGAATTGTTTTCTGTTTTTCATTTTGAAGAGCATTGCTTCTGTGCTCCTGCAAGAGTCATGAATTTCCGAGATGACTCCTGTAGAGTTGAGGGGCCTACAAGCGTTATTAGGTTGAATAACCAGCCTAAAGAACTCTGTAGTGGCGATGAGTATGTTCCAAGCAGTGGAACCATGGCATCGGTTGATGAAATGATCAAAGAACTCGAAACCCTTTTGGAATGTATAGAAGGACCGGGTGGTTTCAGGGATGCCTGCACTGTTCACTACGAAAGCTCTGTTTTAGAGCTAGAGGAAGGTATAGAGACACTTTTCAACAGTTGCAGAGTGTGGAAGAGCATAATGGATGAGCGGCTGGGGAAGATCCAACTTATTGTTGATAACACCGTGCAAGTTTTAGCAAGGAAATTTTATATGGAAGGCATTGTCAAGCAAGCTACTGATGGGCAATATTTGGATCTTTGGAATCGCCAGAAGTTGAGTTCTGAACTAGAGCTGAAGCAGCAGCATATATCAAAAGTAAATCAGGAACTGACTAACCAACTGATTGAATTGGAAAGGCATTTGAATACTCTCGAGCTTAATAAATTTGGTGAAAATGATGGCATTCAAATGAGTCAAAGAACTTTTCCTGGAAGATATGGGCCTTCGAGAAATGTCCAGTCCTTGCGTAGTTTATGTAATACAATGACTTCACAATTAGCTGCTGCAGAGCAACTTTCTGAATGTCTCACAAAACAGATGGCTGTGTTGAGTATTGAGCCACCTTCTGGGAAAACACAAAATGTGAGAAGAGACTTGTTTGAAGAAATTGGGATCCCTTACAACAGTGCCTCATTTAGCTCTCCAGATGGAAAAGTAGCTGGTGATACCCACTCAAACAAAAGACTCTTAACTTCTTCATGCTCTGATGCTGGTAAAGGCCAGTCCAGGAGAAATCAACCGAGTGCTACAAGGGGTTCTGAATCAGAGACCGCAAGGAGGAGGCGTGATTCCCTCGACCGGGTAACATTTCTTGAAATGCTTCTGTCATTTTGTCAGGGTGTTGAGGGGCTAGTATATGTTCAGGGTTTTGAACGGTATCCCTTTCTTATAGTTTGTCTGGGGCCCTTCCTTTATGGGTCTTCTTTCAAGGTCACTTCCATTTGCGATGGTGTTATGAGCTGGGCTAGTTTTGAACCTCCAAAAACAACAGTAAAAAGAGTTCTCTTGCATGAAGACCGTGCCAAGGCAAGCGCAGATAGATCCGACTTGTTGGATAAGAAACATGTTAAGTCCCAAATGCGGGAAGGATCAGCAGTTGCTCGTGCAGAGCTCTATACCACCACCTCAACTCTCTTTTATCCTTCTGAGGGAGAAGGAATTCAGGGTAGACCAACAAAACAAGCCTCCGTGTTCTCATCACATTCTGCACCCATATCCTCAATTATTGCCAAACAAAATAATGTAAGGGGGAGTTTCAATCCAACTGCCAACCTATCAAGCAATGGGGAAACTCTAATTGAGAAGCCTGCCCTTACTGTCAACAATTCCGAGAGGTCCCAGGTGGAACTACATCAAACACCATCAGTTTCCAAGAGGTTACATGGGCAGACACTTTCCTTGCAGAAGAAACCCAGTGAAATGTCAGATTCGAATGAAGAAGACACCTATCTTGTGAAGTCTACATTTGAGAGCAGGAACCATCATCCTAGCATCACCAAAAGCTCTTTTATGAATATGAAATCTGGGAAAGGTTTTGAATCACCATTTCATTATTCACCAGCTCCCAACTTGAATGCAGAAGTTTTCCATTCTGATACTGCAGCAAGTAAAAGCCATTCTGGTAGCTTAACATCACCATCTCCTATGCTTTCAACTTCCAGTAGTCCATCATCTGCACCGGTCCTTTCATCATTACTGTTCCCATCTTCTTTACCGGATCCAACTGAAAAAACCTCATCATTACCCATCTCAATTGGAAGATCATCTACTAGTTCCAAACCCGGTACATATGGTAGTCAGACTGCCTTGCTTTCCCAATCATCGAGCTCTTCCTCTTCATTTCTTTCTTCTGTCTCCTCTTATCAAGTTCCTGAAAAAGCAGTGCCCTCAGCTATCCCCATTCCTTCTATGAACTTTGAAACTGAGTCTCCCAAGAGAGAGCAACAGCATCCTATACCTAAGCTTACCTCCACAACAGAAGAGAGTTCTACAGTTCATAGTTCATCTCCAAAGAATGAGACTGGATTTACTTTGAAGCTCGAGTCTTCATTGCCATTCAGGCCTGGAGGTGAACCTTCCGCTAATTTGCAATCTGTGAGTAAGCCGAGTTTTGATGGCATGGCAAATCACACAATGAATTCTAAACCCGGACTGTCATTCACAACAGACATGTCTGCAGCACTTCTATCAATGTCTGGGAGTGCCAGTGGTGGAAAAAGTGAAAGTGCAAACGTCGCGGTCACCCAGGAGGATGAGATGGATGAGGAAGCTCCTGAGACAAGTCAGACAAATGAACTCACTTTAGGAAGCCTTGGTAGTTTTGGGATTGGTTCATCCCCAAATCCCACTCCTGGCAAGCCAAATCCATTTGGCGGGGCATTTGGTAGTGTGGTGTCAACTCCAGCTAGCTCGCCATTTAGTATGACTATTCCTACAGGAGAGCTGTTTCGACCTGCATCCTTCAGCTTTCAATCTCCACAACCTTTCCAACCATCCCAGCTAACAAACTTTGGTACACTCTCCGGTGGGTTGAGTACGGGAACCACTCCTCAGATCTCTGCTGCAGGAAGTGGATTTGGGCAGCTTGCACAGCTTGGATCAGGGCAGCAAGCTTTAGGATCAGTTCTTGGTGCATTTGGACAGTCAAGACAGCTTGGCGGTGTTGGACCTGGTACAAGTCCCTCTTCCGCTAGCGGTTTCAGTGGTGGTTTGATCAGCTCACCTTCCACCGGTGGCTTTGCAATATCTTCAACTGGTGGTGGGTTTGCTGGTGCTGCGTCACCTGGAGGTGGATTTGCTGCTGCTGCCTCAGCTGGTGGCGGGTTCGGTGGCATTACTGCAGCTGGAGGGGGATTTGCTGCCCCTGCCTCAGCTGGTGGTGGTTTTGCAGGAGCTGCTTCTGGCAGTGGATTCCCCAGTTCAGGTGGTGGATTTGGAGCCTTCAACAGCCAGCAAGGAAGTGGTGGCTTCTCTGCATTTGGTAGCAGTGCAGGAGGGACTGGAAGACCCCCATCTCCACTTTTCACACAGATGAGAAAATAG |
| Protein: MAATEGNSIILRSDDEVEGERRGSDDYCFIGIGEAVPIKPGDDAEFNPQNPPSKPLSVSERYGLIFVSHSTGFCVARTKDIIDSAKEIAEKGSGSSIKALSVVDVPIGQVYILALSADSSTLAACIDGKIHFFSVASFLNKVQSPFFSCSLDDSSCVKDMQWTKKLENYYAVLSNHGNLYYGAGQDPLKNVMDDVDAFDWSLKGNLVAVARKNTLSIMSLKLKEKVSISLSFDSWIGDSNLNFGVKVDSIRWVRPDAIILGCFKLTSDGKEENYLVQVITSKDGKFTDTSSKPIVLSFSDVFEAFVDDIVPFGSGPYMSMSYLSRCELAITANRKSTDQHIVLFGWSLDDRKEAAVIDIVRDTLCPKIALQGNGDDNIVLGLCVDRISQNEKIEVQLGAEYKELSPFCILLCLSLDGKLFMYQVASVAGPSVPPDNVSLLSDEEDDTPTLVSSEDGKPSTSGGLVSKSVQVGLRFQSQGVDKKELLIKEGNGIPVTNAPMRPVNSERLEILGQQKFLVTKVDQDKDGQQSLLSASQGPYFRHLSPKSSCLEEPGPVVIDFSKVETKKLPEGGSSLVSFPGKFSSNVSSQSISTTLPRAFDLGKELPENLESASLKGAPSSPTSNAKHTFPVTSDGGFSFVPPGSIQSNRSDTSRTNSSDAHFPGVPLGNFSHAKQAAGSSMAFSSSGKTLYSGGQSASTGPVIAHPLPAIRSSVSSSQQNFAPVNSSKENYRAASPTRLLNTEPQLSKQFGNVGELFSVFHFEEHCFCAPARVMNFRDDSCRVEGPTSVIRLNNQPKELCSGDEYVPSSGTMASVDEMIKELETLLECIEGPGGFRDACTVHYESSVLELEEGIETLFNSCRVWKSIMDERLGKIQLIVDNTVQVLARKFYMEGIVKQATDGQYLDLWNRQKLSSELELKQQHISKVNQELTNQLIELERHLNTLELNKFGENDGIQMSQRTFPGRYGPSRNVQSLRSLCNTMTSQLAAAEQLSECLTKQMAVLSIEPPSGKTQNVRRDLFEEIGIPYNSASFSSPDGKVAGDTHSNKRLLTSSCSDAGKGQSRRNQPSATRGSESETARRRRDSLDRVTFLEMLLSFCQGVEGLVYVQGFERYPFLIVCLGPFLYGSSFKVTSICDGVMSWASFEPPKTTVKRVLLHEDRAKASADRSDLLDKKHVKSQMREGSAVARAELYTTTSTLFYPSEGEGIQGRPTKQASVFSSHSAPISSIIAKQNNVRGSFNPTANLSSNGETLIEKPALTVNNSERSQVELHQTPSVSKRLHGQTLSLQKKPSEMSDSNEEDTYLVKSTFESRNHHPSITKSSFMNMKSGKGFESPFHYSPAPNLNAEVFHSDTAASKSHSGSLTSPSPMLSTSSSPSSAPVLSSLLFPSSLPDPTEKTSSLPISIGRSSTSSKPGTYGSQTALLSQSSSSSSSFLSSVSSYQVPEKAVPSAIPIPSMNFETESPKREQQHPIPKLTSTTEESSTVHSSSPKNETGFTLKLESSLPFRPGGEPSANLQSVSKPSFDGMANHTMNSKPGLSFTTDMSAALLSMSGSASGGKSESANVAVTQEDEMDEEAPETSQTNELTLGSLGSFGIGSSPNPTPGKPNPFGGAFGSVVSTPASSPFSMTIPTGELFRPASFSFQSPQPFQPSQLTNFGTLSGGLSTGTTPQISAAGSGFGQLAQLGSGQQALGSVLGAFGQSRQLGGVGPGTSPSSASGFSGGLISSPSTGGFAISSTGGGFAGAASPGGGFAAAASAGGGFGGITAAGGGFAAPASAGGGFAGAASGSGFPSSGGGFGAFNSQQGSGGFSAFGSSAGGTGRPPSPLFTQMRK |